Difference between revisions of "Book:The Complete Guide to LIMS and Laboratory Informatics"

From LIMSWiki
Jump to navigationJump to search
(More updates.)
m (Tweak)
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Saved book
{{Saved book
  |title=The Complete Guide to LIMS & Laboratory Informatics
  |title=The Complete Guide to LIMS and Laboratory Informatics
  |subtitle=2019 Edition
  |subtitle=2022 Edition
  |cover-image=Icos Laboratories.JPG
  |cover-image=Fig8 Liscouski LabTechPlanMan20.png
  |cover-color= #ffffff
  |cover-color= #33CCFF
  | setting-papersize = A4
  | setting-papersize = A4
  | setting-showtoc = 1
  | setting-showtoc = 1
Line 9: Line 9:
}}
}}


== The Complete Guide to LIMS & Laboratory Informatics: 2019 Edition ==
'''Title''': ''The Complete Guide to LIMS and Laboratory Informatics''
;1. About the Content of This Guide
 
:[[LIMSwiki mission]]
'''Edition''': 2022 Edition
;2. Introduction to Informatics in the Laboratory
 
'''Author for citation''': Shawn E. Douglas
 
'''License for content''': [https://creativecommons.org/licenses/by-sa/4.0/ Creative Commons Attribution-ShareAlike 4.0 International]
 
'''Publication date''': January 2022
 
 
[[Laboratory informatics]] solutions are as unique as the [[Laboratory|laboratories]] that depend on them, coming in many "flavors." Sorting through this great variety of systems can be a daunting task. Add in the fact that many laboratories don't have the personnel who understand every nuance of laboratory informatics and the [[laboratory information management system]] (LIMS) or [[laboratory information system]] (LIS) they require, and it quickly becomes obvious that finding the ideal LIMS is no simple task.
 
This annually updated guide provides a comprehensive and informative body of knowledge as it relates to the laboratory and implementing informatics solutions within it. From the software, hardware, and data management side of laboratory informatics to considerations towards security, acquisition, and implementation of the ideal solution, the reader is provided with a wealth of knowledge to better guide their LIMS and laboratory informatics decisions.
 
;1. Informatics in the laboratory
:[[Information]]
:[[Information]]
:[[Informatics (academic field)]]
:[[Informatics (academic field)]]
:[[Laboratory]]
:[[Laboratory]]
:[[Laboratory informatics]]
:[[Laboratory informatics]]
;3. Informatics Across Several Industries
;2. Informatics across the sciences
:[[Bioinformatics]]
:[[Bioinformatics]]
:[[Cancer informatics]]
:[[Cancer informatics]]
:[[Chemical informatics]]
:[[Chemical informatics]]
:[[Environmental informatics]]
:[[Environmental informatics]]
:[[Evolutionary informatics]]
:[[Genome informatics]]
:[[Geoinformatics]]
:[[Health informatics]]
:[[Health informatics]]
:[[Hydroinformatics]]
:[[Imaging informatics]]
:[[Imaging informatics]]
:[[Immunoinformatics]]
:[[Molecular informatics]]
:[[Public health informatics]]
:[[Public health informatics]]
;4. All about LIMS and LIS
;3. All about LIMS and LIS
:[[Laboratory information management system]]
:[[Laboratory information management system]]
:[[LIMS feature]]
:[[LIMS feature]]
:[[Laboratory information system]]
:[[Laboratory information system]]
:[[LIS feature]]
:[[LIS feature]]
;5. Other Laboratory Informatics and Related Applications
;4. Other laboratory informatics and support applications
:[[Chromatography data system]]
:[[Document management system]]
:[[Document management system]]
:[[Chromatography data management system]]
:[[Electronic data capture|Electronic data capture system]]
:[[Electronic data capture|Electronic data capture system]]
:[[Electronic laboratory notebook]]
:[[Electronic laboratory notebook]]
:[[Enterprise resource planning|Enterprise resource planning system]]
:[[Enterprise resource planning|Enterprise resource planning system]]
:[[Laboratory execution system]]
:[[Laboratory execution system]]
:[[Picture archiving and communication system]]
:[[Scientific data management system]]
:[[Scientific data management system]]
;6. Laboratory Informatics Considerations - Software and Hardware
;5. Laboratory informatics considerations: Software and hardware
:''[[LII:Notes on Instrument Data Systems|Notes on Instrument Data Systems]]''
:[[Application programming interface]]
:[[Application programming interface]]
:[[Cloud computing]]
:[[Cloud computing]]
:[[Cloud computing security]]
:[[Desktop virtualization]]
:[[Desktop virtualization]]
:[[Distributed computing]]
:[[Distributed computing]]
Line 52: Line 65:
:[[Middleware]]
:[[Middleware]]
:[[Modularity]]
:[[Modularity]]
:[[Platform as a service]]
:[[Scientific instrument]]
:[[Scientific instrument]]
:[[Software as a service]]
:[[Software as a service]]
;7. Laboratory Informatics Considerations - Data Management and Security
;6. Laboratory informatics considerations: Data management and security
:[[Audit trail]]
:[[Backup]]
:[[Backup]]
:[[Blockchain]]
:[[Blockchain]]
:[[Cloud computing security]]
:[[Computer security]]
:[[Data analysis]]
:[[Data exchange]]
:[[Data exchange]]
:[[Data integrity]]
:[[Data mapping]]
:[[Data mapping]]
:[[Data migration]]
:[[Data migration]]
Line 75: Line 92:
:[[Single sign-on]]
:[[Single sign-on]]
:[[Web application security]]
:[[Web application security]]
;8. Laboratory Informatics Considerations - Automation
;7. Laboratory informatics considerations: Data, system, and process quality
:[[Corrective and preventive action]]
:[[Data integrity]]
:[[Data quality]]
:[[Good Automated Laboratory Practices]]
:[[Good Automated Manufacturing Practice]]
:[[Lean laboratory]]
:[[Quality assurance]]
:[[Quality control]]
:[[Quality management system]]
:[[Software quality]]
;8. Laboratory informatics considerations: Automation
:''[[LII:Considerations in the Automation of Laboratory Procedures|Considerations in the Automation of Laboratory Procedures]]''
:[[Artificial intelligence]]
:[[Artificial intelligence]]
:[[Barcode]]
:[[Barcode]]
:[[Data exchange]]
:[[Data integration]]
:[[Data integration]]
:[[Data mining]]
:[[Data mining]]
Line 83: Line 113:
:[[Internet of things]]
:[[Internet of things]]
:[[Inventory control]]
:[[Inventory control]]
:[[Laboratory automation]]
:[[Machine learning]]
:[[Predictive maintenance]]
:[[Predictive maintenance]]
:[[Remote data capture]]
:[[SCADA]]
:[[SCADA]]
:[[System integration]]
:[[System integration]]
;9. Laboratory Informatics Considerations - Acquisition and Implementation
;9. Laboratory informatics considerations: Acquisition and implementation
:''[[LII:Laboratory Informatics Software Acquisition and Implementation Considerations|Laboratory Informatics Software Acquisition and Implementation Considerations]]''
:''[[LII:Laboratory Informatics Software Acquisition and Implementation Considerations|Laboratory Informatics Software Acquisition and Implementation Considerations]]''
:[[Business intelligence]]
:[[Business intelligence]]
Line 95: Line 128:
:[[Systems development life cycle]]
:[[Systems development life cycle]]
:[[Workflow]]
:[[Workflow]]
;10. Related Standards and Compliance
;10. Related standards and compliance
:[[21 CFR Part 11]]
:[[21 CFR Part 11]]
:[[40 CFR Part 3]]
:[[40 CFR Part 3]]
:[[ANSI-ASQ National Accreditation Board]]
:[[ASTM E1578]]
:[[ASTM E1578]]
:[[Clinical Laboratory Improvement Amendments]]
:[[Clinical Laboratory Improvement Amendments]]
:[[Good Automated Laboratory Practices]]
:[[Good Automated Manufacturing Practice]]
:[[Health Insurance Portability and Accountability Act]]
:[[Health Insurance Portability and Accountability Act]]
:[[Health Level 7]]
:[[Health Level 7]]
Line 107: Line 139:
:[[ISO/IEC 12207]]
:[[ISO/IEC 12207]]
:[[ISO/IEC 17025]]
:[[ISO/IEC 17025]]
:[[ISO/IEC 29119]]
:[[ISO/TS 16949]]
:[[Regulatory compliance]]
:[[Regulatory compliance]]
:[[The American Society of Crime Laboratory Directors/Laboratory Accreditation Board]]
:[[The NELAC Institute]]
:[[The NELAC Institute]]
;11. Laboratory Informatics Resources
;11. Laboratory informatics resources
:''[[LII:A Guide for Management: Successfully Applying Laboratory Systems to Your Organization's Work|A Guide for Management: Successfully Applying Laboratory Systems to Your Organization's Work]]''
:''[[LII:A Guide for Management: Successfully Applying Laboratory Systems to Your Organization's Work|A Guide for Management: Successfully Applying Laboratory Systems to Your Organization's Work]]''
:''[[LII:Laboratory Information Systems Project Management: A Guidebook for International Implementations|Laboratory Information Systems Project Management: A Guidebook for International Implementations]]''
:''[[LII:Laboratory Information Systems Project Management: A Guidebook for International Implementations|Laboratory Information Systems Project Management: A Guidebook for International Implementations]]''
:[[LIMS and laboratory informatics questionnaire|Laboratory information management system (LIMS) questionnaire]]
:''[[LII:Laboratory Technology Planning and Management: The Practice of Laboratory Systems Engineering|Laboratory Technology Planning and Management: The Practice of Laboratory Systems Engineering]]''
:[[Laboratory information system (LIS) questionnaire]]
:''[[Book:LIMSpec 2019 R1|LIMSpec 2019 R1]]''
:[[Laboratory informatics software (open source)|Open-source laboratory informatics software]]
:[[21 CFR Part 11/Audit guidelines and checklist|21 CFR Part 11: Audit guidelines and checklist]]
:[[21 CFR Part 11/Audit guidelines and checklist|21 CFR Part 11: Audit guidelines and checklist]]
:[[Health Insurance Portability and Accountability Act/Audit guidelines and checklist|Health Insurance Portability and Accountability Act: Audit guidelines and checklist]]
:[[Health Insurance Portability and Accountability Act/Audit guidelines and checklist|Health Insurance Portability and Accountability Act: Audit guidelines and checklist]]
:[[Laboratory informatics software (open source)|Open-source laboratory informatics software]]
:[[LIMSWiki:Resources/Consultants|Laboratory informatics consultants]]
:[[LIMSWiki:Resources/Consultants|Laboratory informatics consultants]]
;12. Laboratory Informatics Vendors with Pricing
;12. Laboratory informatics vendors with pricing
:[[Abbott Informatics Corporation]]
:[[Autoscribe Informatics|Autoscribe Informatics, Inc.]]
:[[Autoscribe Informatics, Inc.]]
:[[Benchling, Inc.]]
:[[Blaze Systems Corporation]]
:[[Blaze Systems Corporation]]
:[[LabLynx, Inc.]]
:[[LabLynx, Inc.]]

Latest revision as of 22:31, 11 February 2022

The Complete Guide to LIMS and Laboratory Informatics
2022 Edition
Fig8 Liscouski LabTechPlanMan20.png
This is a LIMSwiki book, a collection of LIMSwiki articles that can be easily saved, rendered electronically, and ordered as a printed book.

Edit this book: Book Creator · Wikitext
Select format to download:

PDF (A4) · PDF (Letter)

Order a printed copy from these publishers: PediaPress
Start ] [ FAQ ] [ Basic help ] [ Advanced help ] [ Feedback ] [ Recent Changes ]


Title: The Complete Guide to LIMS and Laboratory Informatics

Edition: 2022 Edition

Author for citation: Shawn E. Douglas

License for content: Creative Commons Attribution-ShareAlike 4.0 International

Publication date: January 2022


Laboratory informatics solutions are as unique as the laboratories that depend on them, coming in many "flavors." Sorting through this great variety of systems can be a daunting task. Add in the fact that many laboratories don't have the personnel who understand every nuance of laboratory informatics and the laboratory information management system (LIMS) or laboratory information system (LIS) they require, and it quickly becomes obvious that finding the ideal LIMS is no simple task.

This annually updated guide provides a comprehensive and informative body of knowledge as it relates to the laboratory and implementing informatics solutions within it. From the software, hardware, and data management side of laboratory informatics to considerations towards security, acquisition, and implementation of the ideal solution, the reader is provided with a wealth of knowledge to better guide their LIMS and laboratory informatics decisions.

1. Informatics in the laboratory
Information
Informatics (academic field)
Laboratory
Laboratory informatics
2. Informatics across the sciences
Bioinformatics
Cancer informatics
Chemical informatics
Environmental informatics
Genome informatics
Health informatics
Imaging informatics
Immunoinformatics
Molecular informatics
Public health informatics
3. All about LIMS and LIS
Laboratory information management system
LIMS feature
Laboratory information system
LIS feature
4. Other laboratory informatics and support applications
Chromatography data system
Document management system
Electronic data capture system
Electronic laboratory notebook
Enterprise resource planning system
Laboratory execution system
Picture archiving and communication system
Scientific data management system
5. Laboratory informatics considerations: Software and hardware
Notes on Instrument Data Systems
Application programming interface
Cloud computing
Desktop virtualization
Distributed computing
Interface (computing)
Internationalization and localization
Message broker
Middleware
Modularity
Platform as a service
Scientific instrument
Software as a service
6. Laboratory informatics considerations: Data management and security
Audit trail
Backup
Blockchain
Cloud computing security
Computer security
Data analysis
Data exchange
Data mapping
Data migration
Data retention
Data visualization
Electronic signature
Encryption
Information management
Information privacy
Information security
Information security management
Master data
Metadata
Network security
Retention period
Single sign-on
Web application security
7. Laboratory informatics considerations: Data, system, and process quality
Corrective and preventive action
Data integrity
Data quality
Good Automated Laboratory Practices
Good Automated Manufacturing Practice
Lean laboratory
Quality assurance
Quality control
Quality management system
Software quality
8. Laboratory informatics considerations: Automation
Considerations in the Automation of Laboratory Procedures
Artificial intelligence
Barcode
Data exchange
Data integration
Data mining
Environmental monitoring
Internet of things
Inventory control
Laboratory automation
Machine learning
Predictive maintenance
Remote data capture
SCADA
System integration
9. Laboratory informatics considerations: Acquisition and implementation
Laboratory Informatics Software Acquisition and Implementation Considerations
Business intelligence
Change control
Functional requirement
Risk assessment
Stakeholder analysis
Systems development life cycle
Workflow
10. Related standards and compliance
21 CFR Part 11
40 CFR Part 3
ANSI-ASQ National Accreditation Board
ASTM E1578
Clinical Laboratory Improvement Amendments
Health Insurance Portability and Accountability Act
Health Level 7
ISO 9000
ISO/IEC 12207
ISO/IEC 17025
Regulatory compliance
The NELAC Institute
11. Laboratory informatics resources
A Guide for Management: Successfully Applying Laboratory Systems to Your Organization's Work
Laboratory Information Systems Project Management: A Guidebook for International Implementations
Laboratory Technology Planning and Management: The Practice of Laboratory Systems Engineering
LIMSpec 2019 R1
21 CFR Part 11: Audit guidelines and checklist
Health Insurance Portability and Accountability Act: Audit guidelines and checklist
Open-source laboratory informatics software
Laboratory informatics consultants
12. Laboratory informatics vendors with pricing
Autoscribe Informatics, Inc.
Benchling, Inc.
Blaze Systems Corporation
LabLynx, Inc.
All laboratory informatics vendors with pricing