Difference between revisions of "OpenChrom"

From LIMSWiki
Jump to navigationJump to search
m (→‎Product history: Updated latest release.)
(CDMS to CDS)
(2 intermediate revisions by the same user not shown)
Line 17: Line 17:
| language              =  
| language              =  
| status                =  
| status                =  
| genre                  = [[Laboratory informatics]] software<br />[[Chromatography data management system|CDMS]] software
| genre                  = [[Laboratory informatics]] software<br />[[Chromatography data system|CDS]] software
| license                = Eclipse Public License 1.0
| license                = Eclipse Public License 1.0
| website                = [http://www.openchrom.net/ OpenChrom.net]
| website                = [http://www.openchrom.net/ OpenChrom.net]
Line 27: Line 27:


OpenChrom was created to resolve the constraints of accessing, managing, and representing mass spectral data (as well as accessing the algorithms used to process the data) from propriety closed systems, typically limited to certain software platforms.<ref name="BMCPaper">{{cite journal |journal=BMC Bioinformatics |year=2010 |volume=11 |pages=405 |title=OpenChrom: a cross-platform open source software for the mass spectrometric analysis of chromatographic data |author=Wenig, Philip; Odermatt, Juergen |url=http://www.biomedcentral.com/1471-2105/11/405 |doi=10.1186/1471-2105-11-405}}</ref> Version 0.1.0, the first public release, became available on April 12, 2010.<ref name="ChromStart1" /> In August, OpenChrom won additional funds to continue development via the Thomas Krenn Open Source Förderung competition.<ref name="TKFund">{{cite web |url=http://www.thomas-krenn.com/de/wiki/Thomas_Krenn_Open_Source_Förderung_2010 |title=Thomas Krenn Open Source Förderung 2010 |publisher=Thomas-Krenn.AG |date=30 June 2010 |accessdate=26 September 2012}}</ref> OpenChrom won another award on March 21, 2011, in the form of The Eclipse Foundation's award for "Best RCP Application."<ref name="EclipseAward">{{cite web |url=http://www.eclipse.org/org/press-release/20110321_awardwinners.php |title=Eclipse Community Awards Winners Announced |publisher=The Eclipse Foundation |date=21 March 2011 |accessdate=26 September 2012}}</ref>
OpenChrom was created to resolve the constraints of accessing, managing, and representing mass spectral data (as well as accessing the algorithms used to process the data) from propriety closed systems, typically limited to certain software platforms.<ref name="BMCPaper">{{cite journal |journal=BMC Bioinformatics |year=2010 |volume=11 |pages=405 |title=OpenChrom: a cross-platform open source software for the mass spectrometric analysis of chromatographic data |author=Wenig, Philip; Odermatt, Juergen |url=http://www.biomedcentral.com/1471-2105/11/405 |doi=10.1186/1471-2105-11-405}}</ref> Version 0.1.0, the first public release, became available on April 12, 2010.<ref name="ChromStart1" /> In August, OpenChrom won additional funds to continue development via the Thomas Krenn Open Source Förderung competition.<ref name="TKFund">{{cite web |url=http://www.thomas-krenn.com/de/wiki/Thomas_Krenn_Open_Source_Förderung_2010 |title=Thomas Krenn Open Source Förderung 2010 |publisher=Thomas-Krenn.AG |date=30 June 2010 |accessdate=26 September 2012}}</ref> OpenChrom won another award on March 21, 2011, in the form of The Eclipse Foundation's award for "Best RCP Application."<ref name="EclipseAward">{{cite web |url=http://www.eclipse.org/org/press-release/20110321_awardwinners.php |title=Eclipse Community Awards Winners Announced |publisher=The Eclipse Foundation |date=21 March 2011 |accessdate=26 September 2012}}</ref>
A year after its first release, the development team had progressed OpenChrom up to version 0.4.0<ref name="ChromVers" />. The latest release is version 0.8.0, made available in July 2013.<ref name="ChromStart1" />


==Features==
==Features==
Line 80: Line 78:
==External links==
==External links==


* [http://sourceforge.net/projects/openchrom/ OpenChrom on Sourceforge]
* [https://code.google.com/a/eclipselabs.org/p/openchrom/ OpenChrom on Google Code]
* [http://openchrom.wordpress.com/ OpenChrom blog]
* [http://openchrom.wordpress.com/ OpenChrom blog]
* [http://www.openchrom.net/dokuwiki/doku.php OpenChrom documentation]
* [http://www.openchrom.net/dokuwiki/doku.php OpenChrom documentation]
OpenChrom can also be found on SourceForge. However, use caution when downloading and installing from there; the install package may contain undesirable add-on software.


==References==
==References==
Line 89: Line 89:
<!---Place all category tags here-->
<!---Place all category tags here-->
[[Category:Laboratory informatics software (open source)]]
[[Category:Laboratory informatics software (open source)]]
[[Category:Chromatography data management system (open source)]]
[[Category:Chromatography data system (open source)]]

Revision as of 20:37, 18 April 2019

OpenChrom
Openchrom.png
Developer(s) OpenChrom development team
Initial release April 12, 2010 (2010-04-12) (v0.1.0)[1][2]
Stable release

1.3.0  (August 8, 2018; 5 years ago (2018-08-08))

[±]
Preview release 1.3.0-Prev  (April 17, 2018; 5 years ago (2018-04-17)) [±]
Written in Java
Operating system Multi-platform
Type Laboratory informatics software
CDS software
License(s) Eclipse Public License 1.0
Website OpenChrom.net

OpenChrom is free extensible (via plug-ins) open-source chromatography and mass spectrometry software designed to natively handle mass spectrometry system data files.[3]

Product history

OpenChrom was created to resolve the constraints of accessing, managing, and representing mass spectral data (as well as accessing the algorithms used to process the data) from propriety closed systems, typically limited to certain software platforms.[4] Version 0.1.0, the first public release, became available on April 12, 2010.[1] In August, OpenChrom won additional funds to continue development via the Thomas Krenn Open Source Förderung competition.[5] OpenChrom won another award on March 21, 2011, in the form of The Eclipse Foundation's award for "Best RCP Application."[6]

Features

Features include[3]:

  • native handling of chromatographic data
  • data import and export
  • batch processing
  • baseline detection
  • peak detection and integration
  • filtering
  • extensible via plug-ins
  • advanced GUI

Hardware/software requirements

Current requirements include[7]:

  • Java 7
  • 1GB RAM
  • 20GB HDD space
  • 1GHz processor

Videos, screenshots, and other media

Videos:

Screenshots can be found on the project website.

OpenChrom also has a number of available plug-ins.

Entities using OpenChrom

Further reading


External links

OpenChrom can also be found on SourceForge. However, use caution when downloading and installing from there; the install package may contain undesirable add-on software.

References