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'''"[[Journal:Welcome to Jupyter: Improving collaboration and reproduction in psychological research by using a notebook system|Welcome to Jupyter: Improving collaboration and reproduction in psychological research by using a notebook system]]"'''
'''"[[Journal:Eleven quick tips for architecting biomedical informatics workflows with cloud computing|Eleven quick tips for architecting biomedical informatics workflows with cloud computing]]"'''


The reproduction of findings from psychological research has been proven difficult. Abstract description of the data analysis steps performed by researchers is one of the main reasons why reproducing or even understanding published findings is so difficult. With the introduction of [[Jupyter Notebook]], a new tool for the organization of both static and dynamic [[information]] became available. The software allows blending explanatory content like written text or images with code for preprocessing and analyzing scientific data. Thus, Jupyter helps document the whole research process from ideation over data analysis to the interpretation of results. This fosters both collaboration and scientific quality by helping researchers to organize their work. This tutorial is an introduction to Jupyter. It explains how to set up and use the notebook system. While introducing its key features, the advantages of using Jupyter Notebook for psychological research become obvious. ('''[[Journal:Welcome to Jupyter: Improving collaboration and reproduction in psychological research by using a notebook system|Full article...]]''')<br />
[[Cloud computing]] has revolutionized the development and operations of hardware and software across diverse technological arenas, yet academic biomedical research has lagged behind despite the numerous and weighty advantages that cloud computing offers. Biomedical researchers who embrace cloud computing can reap rewards in cost reduction, decreased development and maintenance workload, increased reproducibility, ease of sharing data and software, enhanced security, horizontal and vertical scalability, high availability, a thriving technology partner ecosystem, and much more. Despite these advantages that cloud-based [[workflow]]s offer, the majority of scientific software developed in academia does not utilize cloud computing and must be migrated to the cloud by the user. In this article, we present 11 quick tips for designing biomedical informatics workflows on compute clouds, distilling knowledge gained from experience developing, operating, maintaining, and distributing software and virtualized appliances on the world’s largest cloud. Researchers who follow these tips stand to benefit immediately by migrating their workflows to cloud computing and embracing the paradigm of abstraction. ('''[[Journal:Eleven quick tips for architecting biomedical informatics workflows with cloud computing|Full article...]]''')<br />
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Revision as of 15:55, 13 August 2018

"Eleven quick tips for architecting biomedical informatics workflows with cloud computing"

Cloud computing has revolutionized the development and operations of hardware and software across diverse technological arenas, yet academic biomedical research has lagged behind despite the numerous and weighty advantages that cloud computing offers. Biomedical researchers who embrace cloud computing can reap rewards in cost reduction, decreased development and maintenance workload, increased reproducibility, ease of sharing data and software, enhanced security, horizontal and vertical scalability, high availability, a thriving technology partner ecosystem, and much more. Despite these advantages that cloud-based workflows offer, the majority of scientific software developed in academia does not utilize cloud computing and must be migrated to the cloud by the user. In this article, we present 11 quick tips for designing biomedical informatics workflows on compute clouds, distilling knowledge gained from experience developing, operating, maintaining, and distributing software and virtualized appliances on the world’s largest cloud. Researchers who follow these tips stand to benefit immediately by migrating their workflows to cloud computing and embracing the paradigm of abstraction. (Full article...)

Recently featured:

Welcome to Jupyter: Improving collaboration and reproduction in psychological research by using a notebook system
Developing a file system structure to solve healthcare big data storage and archiving problems using a distributed file system
DataCare: Big data analytics solution for intelligent healthcare management