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<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File: | <div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig2 Stocker BMCBioinformatics2009 10.jpg|220px]]</div> | ||
'''"[[Journal: | '''"[[Journal:iLAP: A workflow-driven software for experimental protocol development, data acquisition and analysis|iLAP: A workflow-driven software for experimental protocol development, data acquisition and analysis]]"''' | ||
Background: In recent years, the genome biology community has expended considerable effort to confront the challenges of managing heterogeneous data in a structured and organized way and developed [[laboratory information management system]]s (LIMS) for both raw and processed data. On the other hand, [[Electronic laboratory notebook|electronic notebooks]] were developed to record and manage scientific data, and facilitate data-sharing. Software which enables both, management of large datasets and digital recording of [[laboratory]] procedures would serve a real need in laboratories using medium and high-throughput techniques. | |||
Results: We have developed iLAP (Laboratory data management, Analysis, and Protocol development), a workflow-driven information management system specifically designed to create and manage experimental protocols, and to analyze and share laboratory data. The system combines experimental protocol development, wizard-based data acquisition, and high-throughput data analysis into a single, integrated system. We demonstrate the power and the flexibility of the platform using a microscopy case study based on a combinatorial multiple fluorescence in situ hybridization (m-FISH) protocol and 3D-image reconstruction. ('''[[Journal:iLAP: A workflow-driven software for experimental protocol development, data acquisition and analysis|Full article...]]''')<br /> | |||
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''Recently featured'': [[Journal:Undertaking sociotechnical evaluations of health information technologies|Undertaking sociotechnical evaluations of health information technologies]], [[Journal:Basics of case report form designing in clinical research|Basics of case report form designing in clinical research | ''Recently featured'': [[Journal:The evolution, use, and effects of integrated personal health records: A narrative review|The evolution, use, and effects of integrated personal health records: A narrative review]], [[Journal:Undertaking sociotechnical evaluations of health information technologies|Undertaking sociotechnical evaluations of health information technologies]], [[Journal:Basics of case report form designing in clinical research|Basics of case report form designing in clinical research]] | ||
Revision as of 15:57, 29 September 2015
Background: In recent years, the genome biology community has expended considerable effort to confront the challenges of managing heterogeneous data in a structured and organized way and developed laboratory information management systems (LIMS) for both raw and processed data. On the other hand, electronic notebooks were developed to record and manage scientific data, and facilitate data-sharing. Software which enables both, management of large datasets and digital recording of laboratory procedures would serve a real need in laboratories using medium and high-throughput techniques.
Results: We have developed iLAP (Laboratory data management, Analysis, and Protocol development), a workflow-driven information management system specifically designed to create and manage experimental protocols, and to analyze and share laboratory data. The system combines experimental protocol development, wizard-based data acquisition, and high-throughput data analysis into a single, integrated system. We demonstrate the power and the flexibility of the platform using a microscopy case study based on a combinatorial multiple fluorescence in situ hybridization (m-FISH) protocol and 3D-image reconstruction. (Full article...)
Recently featured: The evolution, use, and effects of integrated personal health records: A narrative review, Undertaking sociotechnical evaluations of health information technologies, Basics of case report form designing in clinical research
