Difference between revisions of "Template:Article of the week"

From LIMSWiki
Jump to navigationJump to search
(Updated article of the week text.)
(Updated article of the week text)
(36 intermediate revisions by the same user not shown)
Line 1: Line 1:
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 BaronePLOSCompBio2017 13-11.png|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig9 Pathinarupothi BMCMedInfoDecMak2018 18.png|240px]]</div>
'''"[[Journal:Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators|Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators]]"'''
'''"[[Journal:Data to diagnosis in global health: A 3P approach|Data to diagnosis in global health: A 3P approach]]"'''


In a 2016 survey of 704 National Science Foundation (NSF) Biological Sciences Directorate principal investigators (BIO PIs), nearly 90% indicated they are currently or will soon be analyzing large data sets. BIO PIs considered a range of computational needs important to their work, including high-performance computing (HPC), [[bioinformatics]] support, multistep workflows, updated analysis software, and the ability to store, share, and publish data. Previous studies in the United States and Canada emphasized infrastructure needs. However, BIO PIs said the most pressing unmet needs are training in data integration, data management, and scaling analyses for HPC, acknowledging that data science skills will be required to build a deeper understanding of life. This portends a growing data knowledge gap in biology and challenges institutions and funding agencies to redouble their support for computational training in biology. ('''[[Journal:Unmet needs for analyzing biological big data: A survey of 704 NSF principal investigators|Full article...]]''')<br />
With connected medical devices fast becoming ubiquitous in healthcare monitoring, there is a deluge of data coming from multiple body-attached sensors. Transforming this flood of data into effective and efficient diagnosis is a major challenge. To address this challenge, we present a "3P" approach: personalized patient monitoring, precision diagnostics, and preventive criticality alerts. In a collaborative work with doctors, we present the design, development, and testing of a healthcare data analytics and communication framework that we call RASPRO (Rapid Active Summarization for effective PROgnosis). The heart of RASPRO is "physician assist filters" (PAF) that 1. transform unwieldy multi-sensor time series data into summarized patient/disease-specific trends in steps of progressive precision as demanded by the doctor for a patient’s personalized condition, and 2. help in identifying and subsequently predictively alerting the onset of critical conditions. ('''[[Journal:Data to diagnosis in global health: A 3P approach|Full article...]]''')<br />
<br />
<br />
''Recently featured'':
''Recently featured'':
: ▪ [[Journal:Big data as a driver for clinical decision support systems: A learning health systems perspective|Big data as a driver for clinical decision support systems: A learning health systems perspective]]
: ▪ [[Journal:Building a newborn screening information management system from theory to practice|Building a newborn screening information management system from theory to practice]]
: ▪ [[Journal:Implementation and use of cloud-based electronic lab notebook in a bioprocess engineering teaching laboratory|Implementation and use of cloud-based electronic lab notebook in a bioprocess engineering teaching laboratory]]  
: ▪ [[Journal:Adapting data management education to support clinical research projects in an academic medical center|Adapting data management education to support clinical research projects in an academic medical center]]
: ▪ [[Journal:An open experimental database for exploring inorganic materials|An open experimental database for exploring inorganic materials]]
: ▪ [[Journal:Development of an electronic information system for the management of laboratory data of tuberculosis and atypical mycobacteria at the Pasteur Institute in Côte d’Ivoire|Development of an electronic information system for the management of laboratory data of tuberculosis and atypical mycobacteria at the Pasteur Institute in Côte d’Ivoire]]

Revision as of 15:25, 18 March 2019

Fig9 Pathinarupothi BMCMedInfoDecMak2018 18.png

"Data to diagnosis in global health: A 3P approach"

With connected medical devices fast becoming ubiquitous in healthcare monitoring, there is a deluge of data coming from multiple body-attached sensors. Transforming this flood of data into effective and efficient diagnosis is a major challenge. To address this challenge, we present a "3P" approach: personalized patient monitoring, precision diagnostics, and preventive criticality alerts. In a collaborative work with doctors, we present the design, development, and testing of a healthcare data analytics and communication framework that we call RASPRO (Rapid Active Summarization for effective PROgnosis). The heart of RASPRO is "physician assist filters" (PAF) that 1. transform unwieldy multi-sensor time series data into summarized patient/disease-specific trends in steps of progressive precision as demanded by the doctor for a patient’s personalized condition, and 2. help in identifying and subsequently predictively alerting the onset of critical conditions. (Full article...)

Recently featured:

Building a newborn screening information management system from theory to practice
Adapting data management education to support clinical research projects in an academic medical center
Development of an electronic information system for the management of laboratory data of tuberculosis and atypical mycobacteria at the Pasteur Institute in Côte d’Ivoire