Difference between revisions of "Template:Article of the week"

From LIMSWiki
Jump to navigationJump to search
(Updated article of the week text.)
(Updated article of the week text.)
 
(338 intermediate revisions by the same user not shown)
Line 1: Line 1:
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Barillari Bioinformatics2015 32-4.jpg|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Signoroni NatComm23 14.png|240px]]</div>
'''"[[Journal:openBIS ELN-LIMS: An open-source database for academic laboratories|openBIS ELN-LIMS: An open-source database for academic laboratories]]"'''
'''"[[Journal:Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology|Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology]]"'''


The open-source platform [[openBIS]] (open Biology Information System) offers an [[electronic laboratory notebook]] and a [[laboratory information management system]] (ELN-LIMS) solution suitable for the academic life science laboratories. openBIS ELN-LIMS allows researchers to efficiently document their work, to describe materials and methods and to collect raw and analyzed data. The system comes with a user-friendly web interface where data can be added, edited, browsed and searched. The openBIS software, a user guide and a demo instance are available at https://openbis-eln-lims.ethz.ch. The demo instance contains some data from our laboratory as an example to demonstrate the possibilities of the ELN-LIMS. ('''[[Journal:openBIS ELN-LIMS: An open-source database for academic laboratories|Full article...]]''')<br />
Full [[laboratory automation]] is revolutionizing work habits in an increasing number of clinical [[microbiology]] facilities worldwide, generating huge streams of [[Imaging|digital images]] for interpretation. Contextually, [[deep learning]] (DL) architectures are leading to paradigm shifts in the way computers can assist with difficult visual interpretation tasks in several domains. At the crossroads of these epochal trends, we present a system able to tackle a core task in clinical microbiology, namely the global interpretation of diagnostic [[Bacteria|bacterial]] [[Cell culture|culture]] plates, including presumptive [[pathogen]] identification. This is achieved by decomposing the problem into a hierarchy of complex subtasks and addressing them with a multi-network architecture we call DeepColony ... ('''[[Journal:Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology|Full article...]]''')<br />
<br />
''Recently featured'':
''Recently featured'':  
{{flowlist |
: ▪ [[Journal:Health literacy and health information technology adoption: The potential for a new digital divide|Health literacy and health information technology adoption: The potential for a new digital divide]]
* [[Journal:Critical analysis of the impact of AI on the patient–physician relationship: A multi-stakeholder qualitative study|Critical analysis of the impact of AI on the patient–physician relationship: A multi-stakeholder qualitative study]]
: ▪ [[Journal:VennDiagramWeb: A web application for the generation of highly customizable Venn and Euler diagrams|VennDiagramWeb: A web application for the generation of highly customizable Venn and Euler diagrams]]
* [[Journal:Judgements of research co-created by generative AI: Experimental evidence|Judgements of research co-created by generative AI: Experimental evidence]]
: ▪ [[Journal:Molmil: A molecular viewer for the PDB and beyond|Molmil: A molecular viewer for the PDB and beyond]]
* [[Journal:Geochemical biodegraded oil classification using a machine learning approach|Geochemical biodegraded oil classification using a machine learning approach]]
}}

Latest revision as of 15:02, 3 June 2024

Fig1 Signoroni NatComm23 14.png

"Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology"

Full laboratory automation is revolutionizing work habits in an increasing number of clinical microbiology facilities worldwide, generating huge streams of digital images for interpretation. Contextually, deep learning (DL) architectures are leading to paradigm shifts in the way computers can assist with difficult visual interpretation tasks in several domains. At the crossroads of these epochal trends, we present a system able to tackle a core task in clinical microbiology, namely the global interpretation of diagnostic bacterial culture plates, including presumptive pathogen identification. This is achieved by decomposing the problem into a hierarchy of complex subtasks and addressing them with a multi-network architecture we call DeepColony ... (Full article...)
Recently featured: