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...ded into Characteristics (related to Projects) and Annotations (related to Files). Those two types of metadata can be saved into Templates, allowing users t ...n=[http://creativecommons.org/licenses/by/2.0 Creative Commons Attribution 2.0 Generic]

...for analysis steps. Files attached to protocol steps are considered as raw files and are therefore collected under the step container visualized with the R- ...[https://creativecommons.org/licenses/by/2.0/ Creative Commons Attribution 2.0]

...tlas-SNP and Atlas-indel are used to identify variants and produce variant files (VCF). 5) Annotation adds biological and functional information to the vari ...n=[http://creativecommons.org/licenses/by/2.0 Creative Commons Attribution 2.0 Generic]

...of mapped reads whereas secondary workflow (b) involves merging of DHR.bed files from different samples to obtain a set of consolidated regions and then cou ...n=[http://creativecommons.org/licenses/by/2.0 Creative Commons Attribution 2.0 Generic]

...uted environment. While the analyses are running, they store the resulting files on the file system and add information about the run in the database. The p ...n=[http://creativecommons.org/licenses/by/2.0 Creative Commons Attribution 2.0 Generic]