Difference between revisions of "Template:Article of the week"

From LIMSWiki
Jump to navigationJump to search
m (Spacing)
(Updated article of the week text)
 
(342 intermediate revisions by the same user not shown)
Line 1: Line 1:
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig2 Lam BMCBioinformatics2016 17.gif|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig2 Berezin PLoSCompBio23 19-12.png|240px]]</div>
'''"[[Journal:VennDiagramWeb: A web application for the generation of highly customizable Venn and Euler diagrams|VennDiagramWeb: A web application for the generation of highly customizable Venn and Euler diagrams]]"'''
'''"[[Journal:Ten simple rules for managing laboratory information|Ten simple rules for managing laboratory information]]"'''


Visualization of data generated by high-throughput, high-dimensionality experiments is rapidly becoming a rate-limiting step in [[Computational informatics|computational biology]]. There is an ongoing need to quickly develop high-quality visualizations that can be easily customized or incorporated into automated pipelines. This often requires an interface for manual plot modification, rapid cycles of tweaking visualization parameters, and the generation of graphics code. To facilitate this process for the generation of highly-customizable, high-resolution Venn and Euler diagrams, we introduce ''VennDiagramWeb'': a web application for the widely used VennDiagram R package.  
[[Information]] is the cornerstone of [[research]], from experimental data/[[metadata]] and computational processes to complex inventories of reagents and equipment. These 10 simple rules discuss best practices for leveraging [[laboratory information management system]]s (LIMS) to transform this large information load into useful scientific findings. The development of [[mathematical model]]s that can predict the properties of biological systems is the holy grail of [[computational biology]]. Such models can be used to test biological hypotheses, guide the development of biomanufactured products, engineer new systems meeting user-defined specifications, and much more ... ('''[[Journal:Ten simple rules for managing laboratory information|Full article...]]''')<br />


''VennDiagramWeb'' allows real-time modification of Venn and Euler diagrams, with parameter setting through a web interface and immediate visualization of results. It allows customization of essentially all aspects of figures, but also supports integration into computational pipelines via download of [[R (programming language)|R code]]. Users can upload data and download figures in a range of formats, and there is exhaustive support documentation. ('''[[Journal:VennDiagramWeb: A web application for the generation of highly customizable Venn and Euler diagrams|Full article...]]''')<br />
''Recently featured'':
<br />
{{flowlist |
''Recently featured'':  
* [[Journal:Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology|Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology]]
: ▪ [[Journal:Molmil: A molecular viewer for the PDB and beyond|Molmil: A molecular viewer for the PDB and beyond]]
* [[Journal:Critical analysis of the impact of AI on the patient–physician relationship: A multi-stakeholder qualitative study|Critical analysis of the impact of AI on the patient–physician relationship: A multi-stakeholder qualitative study]]
: ▪ [[Journal:Smart electronic laboratory notebooks for the NIST research environment|Smart electronic laboratory notebooks for the NIST research environment]]
* [[Journal:Judgements of research co-created by generative AI: Experimental evidence|Judgements of research co-created by generative AI: Experimental evidence]]
: ▪ [[Journal:Making the leap from research laboratory to clinic: Challenges and opportunities for next-generation sequencing in infectious disease diagnostics|Making the leap from research laboratory to clinic: Challenges and opportunities for next-generation sequencing in infectious disease diagnostics]]
}}

Latest revision as of 18:03, 10 June 2024

Fig2 Berezin PLoSCompBio23 19-12.png

"Ten simple rules for managing laboratory information"

Information is the cornerstone of research, from experimental data/metadata and computational processes to complex inventories of reagents and equipment. These 10 simple rules discuss best practices for leveraging laboratory information management systems (LIMS) to transform this large information load into useful scientific findings. The development of mathematical models that can predict the properties of biological systems is the holy grail of computational biology. Such models can be used to test biological hypotheses, guide the development of biomanufactured products, engineer new systems meeting user-defined specifications, and much more ... (Full article...)

Recently featured:

Retrieved from "https://www.limswiki.org/index.php?title=Template:Article_of_the_week&oldid=64398"