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Welcome to LIMSwiki.org, the laboratory, health, and science informatics encyclopedia.
Users have contributed: 1,577 articles.

LIMSwiki is a collaborative wiki dedicated to the scientific community, featuring organized, documented, and up-to-date content regarding all aspects of laboratory informatics, bioinformatics, and health informatics. LIMSwiki also strives to maintain relevant knowledge about laboratory equipment as well as commercial and open-source software likely to be used in a laboratory setting. This also includes the vendors of such equipment and software.

Like any community wiki, the value and success of LIMSwiki is dependent upon the scientific community contributing their vast knowledge through the creation of relevant articles and editing of existing articles where knowledge is absent. If you wish to enrich the content of this wiki or have something of value to add, please request an account and get started.


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Featured article of the week

Fig1 Closha BMCBioinfo2018 19-Sup1.gif

"Closha: Bioinformatics workflow system for the analysis of massive sequencing data"

While next-generation sequencing (NGS) costs have fallen in recent years, the cost and complexity of computation remain substantial obstacles to the use of NGS in bio-medical care and genomic research. The rapidly increasing amounts of data available from the new high-throughput methods have made data processing infeasible without automated pipelines. The integration of data and analytic resources into workflow systems provides a solution to the problem by simplifying the task of data analysis.

To address this challenge, we developed a cloud-based workflow management system, Closha, to provide fast and cost-effective analysis of massive genomic data. We implemented complex workflows making optimal use of high-performance computing clusters. Closha allows users to create multi-step analyses using drag-and-drop functionality and to modify the parameters of pipeline tools. (Full article...)

Recently featured:

Big data management for cloud-enabled geological information services
Evidence-based design and evaluation of a whole genome sequencing clinical report for the reference microbiology laboratory
Moving ERP systems to the cloud: Data security issues


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LIMSwiki books
Examples of books printed from Wikipedia

A LIMSwiki book is a collection of LIMSwiki articles that can be easily saved to the wiki, rendered electronically in PDF, or ordered as a printed book. Need to know more about LIMSwiki books?




Laboratory informatics software and products
LIMSwiki journal articles
Open-access articles becoming more common

A LIMSwiki journal article is a selected open-access article relating to various fields of informatics, free to republish elsewhere with proper citation. You can browse the collection using the tools below. Also note that like other articles found on this wiki, journal articles can be added to LIMSwiki books.

For a full listing of journals — open-access and otherwise — relating to laboratory informatics, bioinformatics, and other forms of informatics, please see LIMSWiki:Resources/Journals.


Open-source software
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Looking for open-source software solutions to make your lab or office more efficient? Try these locations:


Additional LIMSwiki resources


Additional information
Latest news

December 4, 2017:

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Relatively new to the wiki but previously unannounced is what will eventually become part of a series on the various industries and settings a laboratory can be found: The Laboratories of Our Lives: Labs, Labs Everywhere!. This guide may eventually change names and be integrated with more content. However, for now it acts as a solid introduction to the concept of how laboratories intersect our lives in ways we may not necessarily expect. The guide first sets a historical stage for the development of the laboratory, and it then offers a basic framework for looking at today's laboratories, whether by science, industry, or function. Then it provides a brief snapshot of 20 different sectors, listing lab examples, test types, equipment used, and how informatics may be applied in those laboratories, followed by a brief closing discussion. Hopefully the guide provides a more inspiring picture of how the laboratory intersects nearly every aspect of our lives.

Shawn Douglas (talk) 17:02, 4 December 2017 (UTC)


April 11, 2017:

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New to the wiki today is the guide Past, Present, and Future of Cannabis Laboratory Testing and Regulation in the United States. This guide provides an in-depth discussion of the ever-changing status of laboratory testing and regulation of the cannabis plant in the United States. From the history, regulations, and standards to the chemical properties of cannabis and the laboratory methods used to define them, this Creative Commons-based work covers the social, political, and economic circumstances surrounding the controversial plant. It also looks at the equipment, software, and reporting of testing labs; provides future-looking trends and guidance both nationally and internationally; and offers a full directory of resources associated with cannabis testing and legislation. Enjoy!

Shawn Douglas (talk) 02:00, 11 April 2017 (UTC)


Most popular pages

This section represents most popular pages by page view as of January 2016. You can still find records of our Top 30 listings back to April 2012 on the history page for this template. Simply click on the "prev" link of an edit on that page and scroll down to see the listing as it was for that date.



The most popular pages (by page views) on LIMSwiki as of April 6, 2018 are:

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  8. 21 CFR Part 11/Audit guidelines and checklist‏‎ (28,807 views)
  9. Laboratory information system (25,722 views)
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  11. Laboratory informatics (21,431 views)
  12. LIS feature (21,369 views)
  13. Laboratory information management system (19,560 views)
  14. Physician office laboratory (18,669 views)
  15. LabLynx, Inc. (17,334 views)
  16. LabWare, Inc. (16,655 views)
  17. Thermo Scientific (16,206 views)
  18. Health informatics (15,617 views)
  19. Electronic laboratory notebook‏‎ (12,826 views)
  20. Scientific data management system (12,624 views)
  21. Cloud computing (11,390 views)
  22. Reference laboratory (10,968 views)
  23. LIMSwiki mission (9,731 views)
  24. 21 CFR Part 11‏‎ (9,390 views)
  25. Laboratory, Scientific, and Health Informatics Buyer's Guide‏‎ (9,138 views)
  26. Health Insurance Portability and Accountability Act‏‎ (9,112 views)
  27. LIMS and laboratory informatics questionnaire (8,890 views)
  28. ELN feature‏‎ (8,824 views)
  29. LabVantage Solutions, Inc.‏‎ (8,724 views)
  30. Laboratory‏‎ (8,405 views)