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<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig2 Liscouski PlanDisruptLabOper2022.png|240px]]</div>
<div style="float: left; margin: 0.5em 0.9em 0.4em 0em;">[[File:Fig1 Signoroni NatComm23 14.png|240px]]</div>
'''"[[LII:Planning for Disruptions in Laboratory Operations|Planning for Disruptions in Laboratory Operations]]"'''
'''"[[Journal:Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology|Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology]]"'''


A high-level of productivity is something laboratory management wants and those working for them strive to achieve. However, what happens when reality trips us up? We found out when [[COVID-19]] appeared. This work from laboratory informatics veteran Joe Liscouski examines how [[laboratory]] operations can be organized to meet that disruption, as well as other disruptions we may have to face. Many of these changes, including the introduction of new technologies and changing attitudes about work, were in the making already but at a much slower pace. Over the years, productivity has had many measures, from 40 to 60 hour work weeks and piece-work to pounds of material processed to samples run, all of which comes from a manufacturing mind set. People went to work in an office, lab, or production site, did their work, put in their time, and went home. That was in the timeframe leading up to the 1950s and '60s. Today, in 2022, things have changed ... ('''[[LII:Planning for Disruptions in Laboratory Operations|Full article...]]''')<br />
Full [[laboratory automation]] is revolutionizing work habits in an increasing number of clinical [[microbiology]] facilities worldwide, generating huge streams of [[Imaging|digital images]] for interpretation. Contextually, [[deep learning]] (DL) architectures are leading to paradigm shifts in the way computers can assist with difficult visual interpretation tasks in several domains. At the crossroads of these epochal trends, we present a system able to tackle a core task in clinical microbiology, namely the global interpretation of diagnostic [[Bacteria|bacterial]] [[Cell culture|culture]] plates, including presumptive [[pathogen]] identification. This is achieved by decomposing the problem into a hierarchy of complex subtasks and addressing them with a multi-network architecture we call DeepColony ... ('''[[Journal:Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology|Full article...]]''')<br />
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Latest revision as of 15:02, 3 June 2024

Fig1 Signoroni NatComm23 14.png

"Hierarchical AI enables global interpretation of culture plates in the era of digital microbiology"

Full laboratory automation is revolutionizing work habits in an increasing number of clinical microbiology facilities worldwide, generating huge streams of digital images for interpretation. Contextually, deep learning (DL) architectures are leading to paradigm shifts in the way computers can assist with difficult visual interpretation tasks in several domains. At the crossroads of these epochal trends, we present a system able to tackle a core task in clinical microbiology, namely the global interpretation of diagnostic bacterial culture plates, including presumptive pathogen identification. This is achieved by decomposing the problem into a hierarchy of complex subtasks and addressing them with a multi-network architecture we call DeepColony ... (Full article...)
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