File:Fig2 Joppich PeerJ2019 7.jpg

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Summary

Description

Fig. 2 bioGUI use-case study, from a developer’s and user’s perspective, performed on an exemplary RNAseq analysis workflow. The dark-gray underlayed tasks represent the developer’s tasks, and the bright-yellow part represents the analysis pipeline the user wants to execute. Tasks requiring user-action are shown as rectangles and intermediate results are shown in ellipses. Cyan ellipses denote solutions/results (e.g., template repository) offered by bioGUI. bioGUI starts sub-processes for each task, such that the overhead for any started processes is as small as possible. Upon finishing a task or pipeline, bioGUI can display a notification and open generated output.

Source

Joppich, M.; Zimmer, R. (2019). "From command-line bioinformatics to bioGUI". PeerJ 7: e8111. doi:10.7717/peerj.8111. 

Date

2019

Author

=Joppich, M.; Zimmer, R.

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(Reusing this file)

Creative Commons Attribution 4.0 International

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current23:12, 6 January 2020Thumbnail for version as of 23:12, 6 January 20201,200 × 775 (176 KB)Shawndouglas (talk | contribs)

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