File:Fig4 Hernandez BMCSystemsBiology2014 8-Suppl2.jpg
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Summary
| Description |
Figure 4. Example of primary and secondary workflow for a DNase-seq analysis. Primary workflow (a) involves calling DNase hypersensitivity regions (DHR) by applying a peak-calling algorithm to a BAM file of mapped reads whereas secondary workflow (b) involves merging of DHR.bed files from different samples to obtain a set of consolidated regions and then counting the number of reads of each sample in the consolidated region set to generate a per-sample signal value file. |
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| Source |
Hernández-de-Diego, R.; Boix-Chova, N.; Gómez-Cabrero, D.; Tegner, J.; Abugessaisa, I.; Conesa, A. (2014). "STATegra EMS: An experiment management system for complex next-generation omics experiments". BMC Systems Biology 8 (Suppl 2): S9. ISSN 1752-0509. |
| Date |
2014 |
| Author |
Hernández-de-Diego, R.; Boix-Chova, N.; Gómez-Cabrero, D.; Tegner, J.; Abugessaisa, I.; Conesa, A. |
| Permission (Reusing this file) |
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| Other versions |
Licensing
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This work is licensed under the Creative Commons Attribution 2.0 License. |
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| current | 23:42, 14 March 2016 | | 1,200 × 411 (73 KB) | Shawndouglas (talk | contribs) |
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