BASE
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| Original author(s) | Johan Vallon-Christersson, Nicklas Nordborg, Martin Svensson, and Jari Häkkinen |
|---|---|
| Developer(s) | The Lund BASE team |
| Initial release | August 31, 2006 (2.0)[1] |
| Stable release |
3.19.9 (June 7, 2023) [±] |
| Preview release | none [±] |
| Written in | Java |
| Operating system | Cross-platform |
| Type | Laboratory informatics software |
| License(s) | GNU General Public License v3.0 |
| Website | base.thep.lu.se |
BASE is a free open-source laboratory informatics application "designed for laboratories looking for a single point of storage for all information related to their experimentation and for storing, managing, and analysing genomics/transcriptomics data."[2]
Product history
Features
Features of BASE include:
- multi-user local data repository with a web-based interface
- laboratory information management system (LIMS) for both biomaterials and array production
- annotations for clinical other types of information
- hierarchical overview of analysis
- integrated tools like MultiExperiment Viewer
Hardware/software requirements
Videos, screenshots, and other media
Entities using BASE
Further reading
- Vallon-Christersson, Johan; Nordborg, Nicklas; Svensson, Martin; Häkkinen, Jari (2009). "BASE - 2nd generation software for microarray data management and analysis". BMC Bioinformatics (10): 330. doi:10.1186/1471-2105-10-330. http://www.biomedcentral.com/1471-2105/10/330.
External links
References
- ↑ "tags/2.0 @ 6370". Lund BASE team. http://base.thep.lu.se/log/tags/2.0?rev=6370. Retrieved 22 May 2014.
- ↑ "Part I. Overview". BASE 3.2.4 Documentation. Lund BASE team. 14 March 2013. http://base.thep.lu.se/chrome/site/latest/html/overview.html. Retrieved 22 May 2014.
