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<!--       "Welcome to LIMSwiki" and article count       -->
<div style="border-bottom:1px solid #abd5f5; background-color:#59b2db; padding:0.5em 0.5em 0.5em 0.5em; font-size:172%; -moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Welcome to [[LIMSwiki_mission|LIMSwiki.org]], <span style="top:+0.2em; font-size:72%;">the [[Laboratory informatics|laboratory]], [[Health informatics|health]], and science [[informatics]] encyclopedia.</span>
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<br><div style="font-size:162%; border:none; margin:0; padding:0em; color:#000;">Welcome to [[LIMSwiki_mission|LIMSwiki]].</div>
<div style="padding:0.4em 1em 0.3em 1em; font-size:100%;">
<div style="top:+0.2em; font-size:105%;">The free [[Laboratory_informatics|laboratory informatics]] encyclopedia that [[Help:Contents|anyone&nbsp;can&nbsp;edit]].</div>
'''LIMSwiki''' is a collaborative wiki dedicated to the scientific community, featuring organized, documented, and up-to-date content regarding all aspects of [[laboratory informatics]], [[bioinformatics]], and [[health informatics]]. LIMSwiki also strives to maintain relevant knowledge about laboratory equipment as well as commercial and [[:Category:Open-source software|open-source]] software likely to be used in a [[laboratory]] setting. This also includes the [[:Category:Vendors|vendors]] of such equipment and software.</div>
<div id="articlecount" style="font-size:85%;">[[Special:ListUsers|Users]] have contributed: [[Special:Statistics|{{NUMBEROFARTICLES}}]] articles.</div><br>
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Get started</div>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:Ambox blue question.svg|40px]]</div>
Need help getting started with LIMSwiki? Have no fear! Here are some excellent starting points:<br />&nbsp;<br />
 
*[[LIMSwiki mission]]
 
<br />
LIMSwiki and MediaWiki help:
 
*[[:Category:LIMSwiki help documentation|LIMSwiki help documentation]]
*[[Help:MediaWiki basics|LIMSwiki training guides]]
*[[Help:Formatting|Wikitext formatting help and examples]]
*[[Main_Page/news#April_18.2C_2011:|LIMSwiki naming conventions for article titles]]
*[[Help:Using the Internet Archive|Using and citing the Internet Archive]]
*[http://meta.wikimedia.org/wiki/Help:Contents_User's_Guide MediaWiki user's guide]
 
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Featured article of the week</div>
<div style="padding:0.4em 1em 0.3em 1em;"><br />
{{Article of the week}}
<div align="center">'''[[Main Page/Featured article of the week/2024|— See more archived featured articles —]]'''</div>
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Guides, white papers, and more</div>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:Learn.png|40px]]</div>
From implementing [[laboratory informatics]] solutions to securely working in the [[Cloud computing|cloud]], we cover it:<br />&nbsp;<br />
 
*''[[Book:The Complete Guide to LIMS & Lab Informatics|The Complete Guide to LIMS & Laboratory Informatics]]'', 2023 Edition
*''[[LII:LIMSpec 2022 R2|LIMSpec 2022 R2]]'', a laboratory informatics specification
*''[[LII:Laboratory Informatics Buyer's Guide for Medical Diagnostics and Research|Laboratory Informatics Buyer's Guide for Medical Diagnostics and Research]]'', 2022 Edition
*''[[LII:Choosing and Implementing a Cloud-based Service for Your Laboratory|Choosing and Implementing a Cloud-based Service for Your Laboratory]]'', First Edition
* '''[[:Category:LII:Guides, white papers, and other publications|All guides, white papers, and other publications]]'''
* '''[[:Category:LIMS Q&A articles|All LIMS Q&A articles]]'''
<br />
[[File:New-label-overlay.jpg|left|35px]]'''ON THE WIKI''':{{clear}}
 
* ''[[LII:LIMS Selection Guide for Manufacturing Quality Control|LIMS Selection Guide for Manufacturing Quality Control]]''
*''[[LII:Comprehensive Guide to Developing and Implementing a Cybersecurity Plan|Comprehensive Guide to Developing and Implementing a Cybersecurity Plan]]'', Second Edition
*''[[LII:LIMS Selection Guide for ISO/IEC 17025 Laboratories|LIMS Selection Guide for ISO/IEC 17025 Laboratories]]''
*''[[LII:LIMS Selection Guide for Food Safety and Quality|LIMS Selection Guide for Food Safety and Quality]]''
 
 
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">LIMSwiki books</div>
<div style="padding:0.4em 1em 0.3em 1em;">
<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:National Library Symbol.svg|60px]]</div>
[[File:Pedia-still-7.jpg|thumb|right|160px|Examples of books printed from Wikipedia]]<br />A '''[[LIMSWiki:Books|LIMSwiki book]]''' is a collection of LIMSwiki articles that can be easily saved to the wiki, rendered electronically in PDF, or ordered as a printed book. Need to know more about LIMSwiki books?
 
<br />
 
*[{{fullurl:Special:Book|bookcmd=book_creator}} Create a book] - use the book creator
*[[Help:Books|User help]] – help with using the tool
*[[Help:Books/For experts|Advanced help]] – help with advanced functions
*[[Help:Books/FAQ|FAQ]] – a FAQ regarding the tool
*[[Help:Books/Feedback|Feedback]] – report and track bugs
 
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<h2 style="border:1px solid #AAAAAA; background-color:#aae6ef; padding:0.2em 0; margin:0px; font-size: 110%; font-weight:bold; text-indent:0.5em;">Bookshelf</h2>
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<center>'''[[:Category:LIMSwiki books (community books)|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMSwiki books (community books)}}|R}}}}}} LIMSwiki books]]'''.</center>
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|-
<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">Laboratory informatics software and products</div>
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Are you looking for [[LIMS]] software? An [[electronic laboratory notebook]]? Or perhaps laboratory equipment? Try these suggestions:
! style="padding:2px;" |<h2 style="margin:3px; background:#cedff2; font-size:120%; font-weight:bold; border:1px solid #a3b0bf; text-align:left; color:#180360; padding:0.2em 0.4em;">Getting Started</h2>
 
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*[[:Category:Vendors|All active lab equipment and software vendors]]
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*[[Vendor:CDS vendor|Active CDS vendors]]
If you're new to editing a wiki, the best place to start learning editing syntax is the [[Help:Contents|Basic Text Formatting]] help file. <br>&nbsp;<br>Below are some links to introduce you to LIMSwiki:
*[[Vendor:ELN vendor|Active ELN vendors]]
* [[LIMSwiki mission]]
*[[Vendor:LIMS vendor|Active LIMS vendors]]
* [[Special:AllPages|Glossary of all pages]]
*[[Vendor:LIS vendor|Active LIS vendors]]
* [[:Category:Articles with unsourced statements|List of pages with unsourced statements]]
*[[Vendor:SDMS vendor|Active SDMS vendors]]
* [[Main Page/archive|Archive of front-page content]]
*[[Vendor:Miscellaneous informatics software vendor|Active misc. informatics software vendors]]
* [[Add and change request|Add and change requests]]
 
* [[Special:RequestAccount|Request a LIMSwiki account]]
Additional tools:
* [http://meta.wikimedia.org/wiki/Help:Contents_User's_Guide A Wiki User's Guide]
 
* [http://www.mediawiki.org/wiki/Help:FAQ MediaWiki FAQ]
*[[LIMSWiki:Resources/Consultants|Consultancies]]
*[[Vendor:Key laboratory informatics vendors and software|Key laboratory informatics vendors and software]]
*[[Vendor:Inactive vendor|''Inactive'' informatics software vendors]]
*[[:Category:Vendor classes|Classifications of vendors]]
*[[:Category:LIMS vendors by industry|LIMS vendors by industry]]


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! style="padding:2px;" | <h2 style="margin:3px; background:#cedff2; font-size:120%; font-weight:bold; border:1px solid #a3b0bf; text-align:left; color:#180360; padding:0.2em 0.4em;">Latest Updates and News</h2>
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| <h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">February 22, 2012:</h2>
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[[File:EDSAC (21).jpg|thumb|left|Thankfully data storage and analysis in the lab has gotten easier.]]'''Yes, this wiki is still alive!''' It's strange to think it's been almost a year since it was introduced. Since then those with the time to spare have added a wide variety of infrastructure and some content. It has been a slow process, however, and like any major wiki project, more knowledgeable and dedicated editors are needed.


So what has been going on with the wiki? The initial focus was to get some of the major concepts like [[laboratory information management system]] (LIMS) and [[electronic laboratory notebook]] (ELN) documented at least up to a decent state of quality, with room for article improvement later on. Then a fair amount of effort went into documenting just ''who'' is [[LIMS vendor|selling LIMS]], [[LIS vendor|LIS]], [[ELN vendor|ELN]], and [[CDMS vendor|CDMS]]. More infrastructure went into place for [http://limswiki.org/index.php?title=Special%3AAllPages&from=&to=&namespace=14 categories], and a method was put in place for vendors to include a knowledge base on the wiki. Most recently work has been done to track the features LIMS vendors publicly advertise for their LIMS and document them on each vendor page. That work — along with work detailing what each piece of LIMS functionality generally does — is still in progress.
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As for the future, we hope to build a critical mass of people willing to help research, write, and cite information about all things [[laboratory informatics]]. The need for storing laboratory data, analyzing samples, and improving [[workflow]] will only become greater, and with that need comes a demand for clear and referenced information about laboratory data management and the laboratories that require it.
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<div style="border-bottom:1px solid #aae6ef; background-color:#adb9e4; padding:0.2em 0.5em 0.2em 0.5em; font-size:110%; font-weight:bold;-moz-border-radius:10px 10px 0 0; border-radius:10px 10px 0 0;">LIMSwiki journal articles</div>
<div style="padding:0.4em 1em 0.3em 1em;">
<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:WikiJournal of Science logo (flat blue).svg.png|60px]]</div>
[[File:Annual volumes of articles in full immediate open access journals - 1741-7015-10-124-2.png|thumb|right|140px|Open-access articles becoming more common]]<br />A '''[[LIMSWiki:Journal articles|LIMSwiki journal article]]''' is a selected open-access article relating to various fields of informatics, free to republish elsewhere with proper citation. You can browse the collection using the tools below. Also note that like other articles found on this wiki, journal articles can be added to [[LIMSWiki:Books|LIMSwiki books]].


Best,
For a full listing of journals — open-access and otherwise — relating to [[laboratory informatics]], [[bioinformatics]], and other forms of [[informatics]], please see [[LIMSWiki:Resources/Journals]].


[[User:Shawndouglas|Shawn Douglas]] 15:57, 22 February 2012 (EST)
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<center>'''[[:Category:LIMSwiki journal articles|Browse all {{formatnum:{{#expr: {{formatnum:{{PAGESINCATEGORY:LIMSwiki journal articles (all)}}|R}} }}}} journal articles]]'''.</center><br />
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<div style="font-size:90%; text-align:center;">[[:Category:LIMSwiki journal articles on informatics|All {{PAGESINCATEGORY:LIMSwiki journal articles on informatics}} journal articles about informatics in general]]{{·}}[[:Category:LIMSwiki journal articles on health informatics|All {{PAGESINCATEGORY:LIMSwiki journal articles on health informatics}} journal articles about health informatics]]</div>
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:OpenSource.jpg|50px]]</div>
Looking for open-source software solutions to make your lab or office more efficient? Try these locations:


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*[[:Category:Open-source software|All open-source software options, by category]]
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*[[:Category:Electronic laboratory notebooks (open source)|Open-source ELN software]]
! style="padding:2px;" |<h2 style="margin:3px; background:#cef2e0; font-size:120%; font-weight:bold; border:1px solid #a3b0bf; text-align:left; color:#180360; padding:0.2em 0.4em;">Previous Updates and News</h2>
*[[:Category:Laboratory information management systems (open source)|Open-source LIMS software]]
|-
*[[:Category:Laboratory information systems (open source)|Open-source LIS software]]
| <h2 style="font-size:105%; font-weight:bold; text-align:left; color:#000; padding:0.2em 0.4em; width:50%;">May 22, 2011:</h2>
*[[:Category:Scientific data management systems (open source)|Open-source SDMS software]]
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[[File:PBB GE IL10 207433 at fs.png|thumb|left|Genomics is only one branch of science that heavily depends on laboratory informatics.]]While researching modern vendors of [[laboratory informatics]] software, I stumbled across [http://www.labvantage.com/blog/index.php/2011/05/lims-eln-sdms-cdms-ecm-les-lis-edc-and-other-interesting-acronyms/ a post] by [[LABVANTAGE Solutions, Inc.|LABVANTAGE's]] Terry Smallmon from earlier this month. In it he rightfully points out that while the nomenclature of laboratory informatics has historically had distinct subdivisions such as [[LIMS]], [[ELN]], and [[CDS]], times are changing. The lines that differentiate a LIMS from a [[SDMS]], for example, have blurred significantly, almost to the point where the nomenclature is losing its meaning in some cases. Smallmon also notes that as vendors take a more modular approach to laboratory informatics, the distinctions fade even more. Finally he points out that at least for him, determining what a potential customer needs shouldn't be based on nomenclature alone, but rather on the problem(s) a customer is trying to solve.


From my limited perspective, I can't disagree with Smallmon's observations. In fact, the blurred definition of laboratory informatics solutions is referenced in several cases among the major articles. However, I feel it important to emphasize that while definitions of these solutions may be blurring, a rough majority of vendors seem to continue using the nomenclature to describe their offerings. While I can understand the trepidation and skepticism behind trying to more appropriately define the industry nomenclature, the endeavor still seems a worthy one. Sure, we'll never have full agreement on the definition of any one term; however, by making the effort to coalesce the history of laboratory informatics, the industry should in theory have more cohesion.
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As an outsider looking in, I perceive this to be a desirable goal. Laboratory informatics is an increasingly vital component of laboratories and scientific research. I recently was told a story from a programmer friend who works in genomics. He related that from his viewpoint, there's an increasingly large bottleneck between the amount of data being created in genomics labs and how it's stored and processed. This really struck home for me. As technology allows for better data collection, so should it allow for better storage and processing. And laboratory informatics is at the center of all of this. Faster and more efficient systems will be needed, and regardless of nomenclature, these solutions will solve problems.
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<div style="float: left; margin: 0.4em 0.4em 0.4em 0em;">[[File:640px-Key symbol blue.png|50px]]</div><br />
We've created several resources for users of the wiki over the years, including the [[LIMSWiki:Resources|LIMSwiki informatics resource portal]], which contains among other tools:


That said, collecting the history and relevant information surrounding the field can only help unify the effort to create better solutions. The names and definitions of those solutions may change with time, but it doesn't mean we shouldn't make the effort. Just as we document the never-ending changes of language in dictionaries, so should we document the changes of the laboratory informatics industry. It's poised to play an important role in humanity's advancement.
#[[LIMSWiki:Resources#Magazines, journals, and blogs|Magazines, journals, and blogs]]
#[[LIMSWiki:Resources#Organizations, not-for-profits, and special interest groups|Organizations, not-for-profits, and special interest groups]]
#[[LIMSWiki:Resources#Conferences and trade shows|Conferences and trade shows]]
#[[LIMSWiki:Resources/Consultants|Consultants]]
#[[LIMSWiki:Resources#Knowledge base, research, and reference|Knowledge base, research, and reference]]
#[[LIMSWiki:Resources#Educational programs, training, and certifications|Educational programs, training, and certifications]]


Best,
<!--//[[File:New-label-overlay.jpg|left|35px]]These resources have received a thorough refresh as of July 2021.{{clear}}//-->
 
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[[User:Shawndouglas|Shawn Douglas]] 18:43, 22 May 2011 (EDT)
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{{Latest news}}
<div align="center">[[Main Page/news|— Read more archived news —]]</div>
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Latest revision as of 22:19, 27 March 2024


Welcome to LIMSwiki.org, the laboratory, health, and science informatics encyclopedia.
Users have contributed: 770 articles.
LIMSwiki is a collaborative wiki dedicated to the scientific community, featuring organized, documented, and up-to-date content regarding all aspects of laboratory informatics, bioinformatics, and health informatics. LIMSwiki also strives to maintain relevant knowledge about laboratory equipment as well as commercial and open-source software likely to be used in a laboratory setting. This also includes the vendors of such equipment and software.


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Featured article of the week

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"Sigma metrics as a valuable tool for effective analytical performance and quality control planning in the clinical laboratory: A retrospective study"

For the release of precise and accurate reports of routine tests, its necessary to follow a proper quality management system (QMS) in the clinical laboratory. As one of the most popular QMS tools for process improvement, Six Sigma techniques and tools have been accepted widely in the laboratory testing process. Six Sigma gives an objective assessment of analytical methods and instrumentation, measuring the outcome of a process on a scale of 0 to 6. Poor outcomes are measured in terms of defects per million opportunities (DPMO). To do the performance assessment of each clinical laboratory analyte by Six Sigma analysis and to plan and chart out a better, customized quality control (QC) plan for each analyte, according to its own sigma value ... (Full article...)
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Guides, white papers, and more
LIMSwiki books
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Examples of books printed from Wikipedia

A LIMSwiki book is a collection of LIMSwiki articles that can be easily saved to the wiki, rendered electronically in PDF, or ordered as a printed book. Need to know more about LIMSwiki books?




Laboratory informatics software and products
LIMSwiki journal articles
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Open-access articles becoming more common

A LIMSwiki journal article is a selected open-access article relating to various fields of informatics, free to republish elsewhere with proper citation. You can browse the collection using the tools below. Also note that like other articles found on this wiki, journal articles can be added to LIMSwiki books.

For a full listing of journals — open-access and otherwise — relating to laboratory informatics, bioinformatics, and other forms of informatics, please see LIMSWiki:Resources/Journals.


Open-source software
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Looking for open-source software solutions to make your lab or office more efficient? Try these locations:


Additional LIMSwiki resources


Additional information
Latest news

November 20, 2023:

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Are you studying some sort of laboratory-based science in university? How well do your classes address laboratory informatics topics, particularly in the scope of industrial labs and how they operate outside of academia? If you find the discussion lacking, then his guide by industry veteran Joe Liscouski will be worth a look. In his guide A Science Student's Guide to Laboratory Informatics, Liscouski presents "an annotated map of the laboratory portion of a technological world, identifying critical points of interest and how they relate to one another, while making recommendations for the reader to learn more." Hope you find it useful! Shawn Douglas (talk) 18:48, 20 November 2023 (UTC)


 

July 26, 2023:

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Do you feel your lab needs laboratory informatics software but you're not sure how to justify it to management? Then this new guide from Joe Liscouski and Shawn Douglas may be just what you need. Justification for a laboratory information management system (LIMS) or some other lab management solution isn't always straightforward with upper management and critical stakeholders; the process will need to be succinct and relevant, based on organizational goals, economic concerns, and practical realities. This guide will help you—whether you are a lab manager, lab technician, or someone else in the organization with a stake in seeing laboratory operations improve—understand what a LIMS is, what the alternatives are, what and why acquiring one looks like, and what needs to be considered in putting together a competent and persuasive LIMS project proposal. This guide also includes a handy Microsoft Excel workbook that will help act as a "cheat sheet" for persuading stakeholders to better buy into your vision of LIMS acquisition and deployment within your organization. Enjoy! Shawn Douglas (talk) 16:32, 26 July 2023 (UTC)